TY - JOUR
T1 - Subarachnoid hemorrhage
T2 - Tests of association with apolipoprotein E and elastin genes
AU - Kaushal, Ritesh
AU - Woo, Daniel
AU - Pal, Prodipto
AU - Haverbusch, Mary
AU - Xi, Huifeng
AU - Moomaw, Charles
AU - Sekar, Padmini
AU - Kissela, Brett
AU - Kleindorfer, Dawn
AU - Flaherty, Matthew
AU - Sauerbeck, Laura
AU - Chakraborty, Ranajit
AU - Broderick, Joseph
AU - Deka, Ranjan
PY - 2007/7/31
Y1 - 2007/7/31
N2 - Background: Apolipoprotein E (APOE) and elastin (ELN) are plausible candidate genes involved in the pathogenesis of stroke. We tested for association of variants in APOE and ELN with subarachnoid hemorrhage (SAH) in a population-based study. We genotyped 12 single nucleotide polymorphisms (SNPs) on APOE and 10 SNPs on ELN in a sample of 309 Caucasian individuals, of whom 107 are SAH cases and 202 are age-, race-, and gender-matched controls from the Greater Cincinnati/Northern Kentucky region. Associations were tested at genotype, allele, and haplotype levels. A genomic control analysis was performed to check for spurious associations resulting from population substructure. Results: At the APOE locus, no individual SNP was associated with SAH after correction for multiple comparisons. Haplotype analysis revealed significant association of the major haplotype (Hap1) in APOE with SAH (p = 0.001). The association stemmed from both the 5' promoter and the 3' region of the APOE gene. APOE ε2 and ε4 were not significantly associated with SAH. No association was observed for ELN at genotype, allele, or haplotype level and our study failed to confirm previous reports of ELN association with aneurysmal SAH. Conclusion: This study suggests a role of the APOE gene in the etiology of aneurysmal SAH.
AB - Background: Apolipoprotein E (APOE) and elastin (ELN) are plausible candidate genes involved in the pathogenesis of stroke. We tested for association of variants in APOE and ELN with subarachnoid hemorrhage (SAH) in a population-based study. We genotyped 12 single nucleotide polymorphisms (SNPs) on APOE and 10 SNPs on ELN in a sample of 309 Caucasian individuals, of whom 107 are SAH cases and 202 are age-, race-, and gender-matched controls from the Greater Cincinnati/Northern Kentucky region. Associations were tested at genotype, allele, and haplotype levels. A genomic control analysis was performed to check for spurious associations resulting from population substructure. Results: At the APOE locus, no individual SNP was associated with SAH after correction for multiple comparisons. Haplotype analysis revealed significant association of the major haplotype (Hap1) in APOE with SAH (p = 0.001). The association stemmed from both the 5' promoter and the 3' region of the APOE gene. APOE ε2 and ε4 were not significantly associated with SAH. No association was observed for ELN at genotype, allele, or haplotype level and our study failed to confirm previous reports of ELN association with aneurysmal SAH. Conclusion: This study suggests a role of the APOE gene in the etiology of aneurysmal SAH.
UR - http://www.scopus.com/inward/record.url?scp=34548067702&partnerID=8YFLogxK
U2 - 10.1186/1471-2350-8-49
DO - 10.1186/1471-2350-8-49
M3 - Article
C2 - 17672902
AN - SCOPUS:34548067702
SN - 1471-2350
VL - 8
JO - BMC Medical Genetics
JF - BMC Medical Genetics
M1 - 49
ER -