ProSynAR: A reference aware read merger

Benjamin Crysup, Bruce Budowle, August E. Woerner

Research output: Contribution to journalArticlepeer-review

Abstract

Motivation: Read-merging algorithms that look solely at the reads can misalign and mis-merge the reads (especially near repetitive sequences). Results: The C++ program ProSynAR has been written to take the reads' position in the reference into account when performing (and deciding whether to perform) a merge. Availability: ∗Nix users can retrieve the source from GitHub (https://github.com/Benjamin-Crysup/prosynar). Windows binary available at https://github.com/Benjamin-Crysup/prosynar/releases/download/1.0/prosynar.zip.

Original languageEnglish
Pages (from-to)2052-2053
Number of pages2
JournalBioinformatics
Volume38
Issue number7
DOIs
StatePublished - 1 Apr 2022

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