Complete genome sequence of Thauera aminoaromatica strain MZ1T

Ke Jiang, John Sanseverino, Archana Chauhan, Susan Lucas, Alex Copeland, Alla Lapidus, Tijana Glavina Del Rio, Eileen Dalin, Hope Tice, David Bruce, Lynne Goodwin, Sam Pitluck, David Sims, Thomas Brettin, John C. Detter, Cliff Han, Y. J. Chang, Frank Larimer, Miriam Land, Loren HauserNikos C. Kyrpides, Natalia Mikhailova, Scott Moser, Patricia Jegier, Dan Close, Jennifer M. DeBruyn, Ying Wang, Alice C. Layton, Michael S. Allen, Gary S. Sayler

Research output: Contribution to journalArticle

32 Citations (Scopus)

Abstract

Thauera aminoaromatica strain MZ1T, an isolate belonging to genus Thauera, of the family Rhodocyclaceae and the class the Betaproteobacteria, has been characterized for its ability to produce abundant exopolysaccharide and degrade various aromatic compounds with nitrate as an electron acceptor. These properties, if fully understood at the genome-sequence level, can aid in environmental processing of organic matter in anaerobic cycles by short-circuiting a central anaerobic metabolite, acetate, from microbiological conversion to methane, a critical greenhouse gas. Strain MZ1T is the first strain from the genus Thauera with a completely sequenced genome. The 4,496,212 bp chromosome and 78,374 bp plasmid contain 4,071 protein-coding and 71 RNA genes, and were sequenced as part of the DOE Community Sequencing Program CSP_776774.

Original languageEnglish
Pages (from-to)325-335
Number of pages11
JournalStandards in Genomic Sciences
Volume6
Issue number3
DOIs
StatePublished - 27 Aug 2012

Fingerprint

Thauera
Genome
Rhodocyclaceae
Betaproteobacteria
Methane
Nitrates
Acetates
Plasmids
Chromosomes
Gases
RNA
Electrons
Genes
Proteins

Keywords

  • Genome
  • MZ1T
  • Thauera aminoaromatica

Cite this

Jiang, K., Sanseverino, J., Chauhan, A., Lucas, S., Copeland, A., Lapidus, A., ... Sayler, G. S. (2012). Complete genome sequence of Thauera aminoaromatica strain MZ1T. Standards in Genomic Sciences, 6(3), 325-335. https://doi.org/10.4056/sigs.2696029
Jiang, Ke ; Sanseverino, John ; Chauhan, Archana ; Lucas, Susan ; Copeland, Alex ; Lapidus, Alla ; Del Rio, Tijana Glavina ; Dalin, Eileen ; Tice, Hope ; Bruce, David ; Goodwin, Lynne ; Pitluck, Sam ; Sims, David ; Brettin, Thomas ; Detter, John C. ; Han, Cliff ; Chang, Y. J. ; Larimer, Frank ; Land, Miriam ; Hauser, Loren ; Kyrpides, Nikos C. ; Mikhailova, Natalia ; Moser, Scott ; Jegier, Patricia ; Close, Dan ; DeBruyn, Jennifer M. ; Wang, Ying ; Layton, Alice C. ; Allen, Michael S. ; Sayler, Gary S. / Complete genome sequence of Thauera aminoaromatica strain MZ1T. In: Standards in Genomic Sciences. 2012 ; Vol. 6, No. 3. pp. 325-335.
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Jiang, K, Sanseverino, J, Chauhan, A, Lucas, S, Copeland, A, Lapidus, A, Del Rio, TG, Dalin, E, Tice, H, Bruce, D, Goodwin, L, Pitluck, S, Sims, D, Brettin, T, Detter, JC, Han, C, Chang, YJ, Larimer, F, Land, M, Hauser, L, Kyrpides, NC, Mikhailova, N, Moser, S, Jegier, P, Close, D, DeBruyn, JM, Wang, Y, Layton, AC, Allen, MS & Sayler, GS 2012, 'Complete genome sequence of Thauera aminoaromatica strain MZ1T', Standards in Genomic Sciences, vol. 6, no. 3, pp. 325-335. https://doi.org/10.4056/sigs.2696029

Complete genome sequence of Thauera aminoaromatica strain MZ1T. / Jiang, Ke; Sanseverino, John; Chauhan, Archana; Lucas, Susan; Copeland, Alex; Lapidus, Alla; Del Rio, Tijana Glavina; Dalin, Eileen; Tice, Hope; Bruce, David; Goodwin, Lynne; Pitluck, Sam; Sims, David; Brettin, Thomas; Detter, John C.; Han, Cliff; Chang, Y. J.; Larimer, Frank; Land, Miriam; Hauser, Loren; Kyrpides, Nikos C.; Mikhailova, Natalia; Moser, Scott; Jegier, Patricia; Close, Dan; DeBruyn, Jennifer M.; Wang, Ying; Layton, Alice C.; Allen, Michael S.; Sayler, Gary S.

In: Standards in Genomic Sciences, Vol. 6, No. 3, 27.08.2012, p. 325-335.

Research output: Contribution to journalArticle

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AU - Jiang, Ke

AU - Sanseverino, John

AU - Chauhan, Archana

AU - Lucas, Susan

AU - Copeland, Alex

AU - Lapidus, Alla

AU - Del Rio, Tijana Glavina

AU - Dalin, Eileen

AU - Tice, Hope

AU - Bruce, David

AU - Goodwin, Lynne

AU - Pitluck, Sam

AU - Sims, David

AU - Brettin, Thomas

AU - Detter, John C.

AU - Han, Cliff

AU - Chang, Y. J.

AU - Larimer, Frank

AU - Land, Miriam

AU - Hauser, Loren

AU - Kyrpides, Nikos C.

AU - Mikhailova, Natalia

AU - Moser, Scott

AU - Jegier, Patricia

AU - Close, Dan

AU - DeBruyn, Jennifer M.

AU - Wang, Ying

AU - Layton, Alice C.

AU - Allen, Michael S.

AU - Sayler, Gary S.

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Jiang K, Sanseverino J, Chauhan A, Lucas S, Copeland A, Lapidus A et al. Complete genome sequence of Thauera aminoaromatica strain MZ1T. Standards in Genomic Sciences. 2012 Aug 27;6(3):325-335. https://doi.org/10.4056/sigs.2696029