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Research Output 2003 2019

2019
Open Access
Retinal Ganglion Cells
Glaucoma
Publications
Cell Death
Animal Models

Spectroscopic method for estimation of MMP-9 enzyme concentration and activity

Synak, A., Serdiuk, I. E., Grobelna, B., Fudala, R., Gryczynski, I. & Bojarski, P., 15 Jul 2019, In : Journal of Molecular Liquids. 286, 110936.

Research output: Contribution to journalArticle

Matrix Metalloproteinases
Peptides
peptides
enzymes
Enzymes
2018
2 Citations (Scopus)

AMCA to TAMRA long range resonance energy transfer on a flexible peptide

Synak, A., Fudala, R., Gryczynski, I., Kułak, L., Shah, S., Serdiuk, I. E., Grobelna, B., Arłukowicz, P., Kubicki, A. & Bojarski, P., Nov 2018, In : Dyes and Pigments. 158, p. 60-64 5 p.

Research output: Contribution to journalArticle

Tranexamic Acid
Energy transfer
Peptides
Fluorescence
Glycerol
1 Citation (Scopus)

Differences in the spatial distribution of actin in the left and right ventricles of functioning rabbit hearts

Nagwekar, J., Duggal, D., Rich, R., Fudala, R., Gryczynski, I., Raut, S., Gryczynski, Z. & Borejdo, J., Mar 2018, In : Medical Photonics. 27, p. 1-8 8 p.

Research output: Contribution to journalArticle

Heart Ventricles
Actins
Myosins
Rabbits
Muscles
2 Citations (Scopus)

Enhanced emission of Nile Red on plasmonic platforms

Synak, A., Bojarski, P., Grobelna, B., Gryczyński, I., Fudala, R. & Mońka, M., Apr 2018, In : Optical Materials. 78, p. 82-87 6 p.

Research output: Contribution to journalArticle

platforms
Fluorescence
fluorescence
matrices
polarity
1 Citation (Scopus)

Surface plasmon-assisted microscope

Borejdo, J., Gryczynski, Z., Fudala, R., Joshi, C. R., Borgmann, K., Ghorpade, A. & Gryczynski, I., 1 Jun 2018, In : Journal of Biomedical Optics. 23, 6, 060502.

Research output: Contribution to journalArticle

Microscopes
microscopes
membranes
metal surfaces
Metals
2017
11 Citations (Scopus)

Fluorescence properties of doxorubicin in PBS buffer and PVA films

Shah, S., Chandra, A., Kaur, A., Sabnis, N., Lacko, A., Gryczynski, Z., Fudala, R. & Gryczynski, I., 1 May 2017, In : Journal of Photochemistry and Photobiology B: Biology. 170, p. 65-69 5 p.

Research output: Contribution to journalArticle

Doxorubicin
Buffers
alcohols
buffers
Fluorescence
2 Citations (Scopus)

Imaging viscosity of intragranular mucin matrix in cystic fibrosis cells

Requena, S., Ponomarchuk, O., Castillo, M., Rebik, J., Brochiero, E., Borejdo, J., Gryczynski, I., Dzyuba, S. V., Gryczynski, Z., Grygorczyk, R. & Fudala, R., 1 Dec 2017, In : Scientific Reports. 7, 1, 16761.

Research output: Contribution to journalArticle

Mucins
Cystic Fibrosis
Viscosity
Optical Imaging
Mucus

No difference in myosin kinetics and spatial distribution of the lever arm in the left and right ventricles of human hearts

Duggal, D., Requena, S., Nagwekar, J., Raut, S., Rich, R., Das, H., Patel, V., Gryczynski, I., Fudala, R., Gryczynski, Z., Blair, C., Campbell, K. S. & Borejdo, J., 13 Oct 2017, In : Frontiers in Physiology. 8, OCT, 732.

Research output: Contribution to journalArticle

Myosins
Heart Ventricles
Muscle Cells
Ventricular Myosins
Muscle Proteins
2016
16 Citations (Scopus)

A triazine-based BODIPY trimer as a molecular viscometer

Raut, S. L., Kimball, J. D., Fudala, R., Bora, I., Chib, R., Jaafari, H., Castillo, M. K., Smith, N. W., Gryczynski, I., Dzyuba, S. V. & Gryczynski, Z., 1 Jan 2016, In : Physical Chemistry Chemical Physics. 18, 6, p. 4535-4540 6 p.

Research output: Contribution to journalArticle

Triazines
viscometers
Viscometers
trimers
cultured cells
2 Citations (Scopus)

Demonstration of FRET in solutions

Shah, S., Gryczynski, Z., Chib, R., Fudala, R., Baxi, A., Borejdo, J., Synak, A. & Gryczynski, I., Mar 2016, In : Methods and Applications in Fluorescence. 4, 1, 015001.

Research output: Contribution to journalArticle

Rhodamines
rhodamine
Energy transfer
Demonstrations
Fluorescence
1 Citation (Scopus)
Hyaluronoglucosaminidase
Fluorophores
Fluorescence
Imaging techniques
Hyaluronic acid
6 Citations (Scopus)
Hyaluronoglucosaminidase
Fluorophores
Biosensing Techniques
Biosensors
Hyaluronic Acid

FRET study in oligopeptide-linked donor-acceptor system in PVA matrix

Shah, S., Mandecki, W., Li, J., Gryczynski, Z., Borejdo, J., Gryczynski, I. & Fudala, R., 13 Dec 2016, In : Methods and Applications in Fluorescence. 4, 4, 1 p.

Research output: Contribution to journalArticle

Oligopeptides
resonance fluorescence
lysine
energy transfer
Lysine

Multi-pulse pumping for far-field super-resolution imaging

Requena, S., Raut, S., Doan, H., Kimball, J., Fudala, R., Borejdo, J., Gryczynski, I., Strzhemechny, Y. & Gryczynski, Z., 1 Jan 2016, Single Molecule Spectroscopy and Superresolution Imaging IX. Enderlein, J., Gregor, I., Gryczynski, Z. K., Erdmann, R. & Koberling, F. (eds.). SPIE, 97140F. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 9714).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optical Imaging
far fields
pumping
Coloring Agents
Imaging techniques
2015
4 Citations (Scopus)

Effect of a myosin regulatory light chain mutation K104E on actin-myosin interactions

Duggal, D., Nagwekar, J., Rich, R., Huang, W., Midde, K., Fudala, R., Das, H., Gryczynski, I., Szczesna-Cordary, D. & Borejdo, J., 15 May 2015, In : American Journal of Physiology - Heart and Circulatory Physiology. 308, 10, p. H1248-H1257

Research output: Contribution to journalArticle

Myosin Light Chains
Myosins
Familial Hypertrophic Cardiomyopathy
Actins
Mutation
2 Citations (Scopus)

Standard reference for instrument response function in fluorescence lifetime measurements in visible and near infrared

Chib, R., Shah, S., Gryczynski, Z., Fudala, R., Borejdo, J., Zelent, B., Corradini, M. G., Ludescher, R. D. & Gryczynski, I., 29 Dec 2015, In : Measurement Science and Technology. 27, 2, 027001.

Research output: Contribution to journalArticle

Fluorescence Lifetime
Response Function
Infrared
Fluorescence
Infrared radiation
2014
38 Citations (Scopus)

A homodimeric BODIPY rotor as a fluorescent viscosity sensor for membrane-mimicking and cellular environments

Raut, S., Kimball, J., Fudala, R., Doan, H., Maliwal, B., Sabnis, N., Lacko, A., Gryczynski, I., Dzyuba, S. V. & Gryczynski, Z., 19 Nov 2014, In : Physical Chemistry Chemical Physics. 16, 48, p. 27037-27042 6 p.

Research output: Contribution to journalArticle

rotors
Rotors
Fluorescence
Viscosity
viscosity
1 Citation (Scopus)

BSA AU clusters as a probe for enhanced fluorescence detection using multipulse excitation scheme

Raut, S. L., Rich, R., Fudala, R., Kokate, R., Kimball, J. D., Borejdo, J., Vishwanatha, J. K., Gryczynski, Z. & Gryczynski, I., 1 Jan 2014, In : Current Pharmaceutical Biotechnology. 14, 13, p. 1139-1144 6 p.

Research output: Contribution to journalArticle

Fluorescence
Optical Imaging
Noise
11 Citations (Scopus)

Fluorescence detection of MMP-9. II. ratiometric FRET-based sensing with dually labeled specific peptide

Fudala, R., Rich, R., Mukerjee, A., Ranjan, A. P., Vishwanatha, J. K., Kurdowska, A. K., Gryczynski, Z., Borejdo, J. & Gryczynski, I., 1 Jan 2014, In : Current Pharmaceutical Biotechnology. 14, 13, p. 1134-1138 5 p.

Research output: Contribution to journalArticle

Energy Transfer
Matrix Metalloproteinases
Fluorescence
Peptides
Enzymes

Fluorescent nanodiamonds for ultrasensitive detection

Kimball, J., Shumilov, D., Maliwa, B., Zerda, T. W., Rout, B., Fudala, R., Raut, S. L., Gryczynski, I., Simanek, E., Borejdo, J., Rich, R., Akopova, I. & Gryczynski, Z., 1 Jan 2014, Single Molecule Spectroscopy and Superresolution Imaging VII. SPIE, 89501H. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 8950).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nanodiamonds
Fluorescence
fluorescence
platforms
Detectors
11 Citations (Scopus)

FRET enhanced fluorescent nanodiamonds

Fudala, R., Raut, S. L., Maliwal, B. P., Zerda, T. W., Gryczynski, I., Simanek, E., Borejdo, J., Rich, R., Akopova, I. & Gryczynski, Z., 1 Jan 2014, In : Current Pharmaceutical Biotechnology. 14, 13, p. 1127-1133 7 p.

Research output: Contribution to journalArticle

Nanodiamonds
Fluorescence Resonance Energy Transfer
Coloring Agents
Fluorescence
Dendrimers
22 Citations (Scopus)

Long lived BSA Au clusters as a time gated intensity imaging probe

Raut, S. L., Fudala, R., Rich, R., Kokate, R. A., Chib, R., Gryczynski, Z. & Gryczynski, I., 7 Mar 2014, In : Nanoscale. 6, 5, p. 2594-2597 4 p.

Research output: Contribution to journalArticle

Fluorescence
Imaging techniques
Tissue
10 Citations (Scopus)

Multiple-pulse pumping for enhanced fluorescence detection and molecular imaging in tissue

Rich, R. M., Gryczynski, I., Fudala, R., Borejdo, J., Stankowska, D. L., Krishnamoorthy, R., Raut, S. L., Maliwal, B. P., Shumilov, D., Doan, H. & Gryczynski, Z., 15 Mar 2014, In : Methods. 66, 2, p. 292-298 7 p.

Research output: Contribution to journalArticle

Molecular imaging
Molecular Imaging
Optical Imaging
Ruthenium
Fluorescence
4 Citations (Scopus)
Myosin Light Chains
Myosins
Skeletal Muscle
Phosphorylation
Rabbits
7 Citations (Scopus)

Preparation of plasmonic platforms of silver wires on gold mirrors and their application to surface enhanced fluorescence

Shtoyko, T., Raut, S., Rich, R. M., Sronce, R. J., Fudala, R., Mason, R. N., Akopova, I., Gryczynski, Z. & Gryczynski, I., 12 Nov 2014, In : ACS Applied Materials and Interfaces. 6, 21, p. 18780-18787 8 p.

Research output: Contribution to journalArticle

Silver
Gold
Fluorescence
Wire
Coloring Agents
6 Citations (Scopus)

Real-time imaging of exocytotic mucin release and swelling in Calu-3 cells using acridine orange

Shumilov, D., Popov, A., Fudala, R., Akopova, I., Gryczynski, I., Borejdo, J., Gryczynski, Z. & Grygorczyk, R., 15 Mar 2014, In : Methods. 66, 2, p. 312-324 13 p.

Research output: Contribution to journalArticle

Acridine Orange
Mucins
Swelling
Fluorescence
Imaging techniques
42 Citations (Scopus)

Resonance energy transfer between fluorescent BSA protected Au nanoclusters and organic fluorophores

Raut, S., Rich, R., Fudala, R., Butler, S., Kokate, R., Gryczynski, Z., Luchowski, R. & Gryczynski, I., 7 Jan 2014, In : Nanoscale. 6, 1, p. 385-391 7 p.

Research output: Contribution to journalArticle

Fluorophores
Nanoclusters
Bovine Serum Albumin
Energy transfer
Dyes

Simple multipulse excitation for enhanced detection of long-lived fluorophores

Kimball, J., Shumilov, D., Fudala, R., Raut, S. L., Gryczynski, I., Borejdo, J., Akopova, I., Grygorczyk, R. & Gryczynski, Z., 1 Jan 2014, Single Molecule Spectroscopy and Superresolution Imaging VII. SPIE, Vol. 8950. 895005

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fluorophores
life (durability)
excitation
Lasers
repetition
1 Citation (Scopus)

The spatial distribution of actin and mechanical cycle of myosin are different in right and left ventricles of healthy mouse hearts

Nagwekar, J., Duggal, D., Rich, R., Raut, S., Fudala, R., Gryczynski, I., Gryczynski, Z. & Borejdo, J., 9 Dec 2014, In : Biochemistry. 53, 48, p. 7641-7649 9 p.

Research output: Contribution to journalArticle

Myosins
Spatial distribution
Heart Ventricles
Actins
Blood
2013
16 Citations (Scopus)

Bruton's tyrosine kinase mediates FcγRIIa/Toll-like receptor-4 receptor crosstalk in human neutrophils

Krupa, A., Fudala, R., Florence, J. M., Tucker, T., Allen, T. C., Standiford, T. J., Luchowski, R., Fol, M., Rahman, M., Gryczynski, Z., Gryczynski, I. & Kurdowska, A. K., 1 Feb 2013, In : American journal of respiratory cell and molecular biology. 48, 2, p. 240-249 10 p.

Research output: Contribution to journalArticle

Toll-Like Receptor 4
Crosstalk
Neutrophils
Interleukin-8
Acute Lung Injury
4 Citations (Scopus)

Detection of hyaluronidase activity using fluorescence lifetime correlation spectroscopy to separate diffusing species and eliminate autofluorescence

Rich, R. M., Mummert, M., Gryczynski, Z., Borejdo, J., Gryczynski, I., Sørensen, T. J., Laursen, B. W. & Fudala, R., 28 May 2013, Single Molecule Spectroscopy and Superresolution Imaging VI. 859003. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 8590).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Hyaluronoglucosaminidase
Hyaluronic Acid
Spectrum Analysis
Macromolecules
macromolecules
39 Citations (Scopus)
Fluorophores
Fluorescence
Tissue
Coloring Agents
Biological Phenomena
19 Citations (Scopus)
Fluorophores
Fluorescence Spectrometry
Photons
Rhodamine 123
Fluorescence
15 Citations (Scopus)

FRET based ratio-metric sensing of hyaluronidase in synthetic urine as a biomarker for bladder and prostate cancer

Chib, R., Raut, S. L., Fudala, R., Chang, A., Mummert, M., Rich, R., Gryczynski, Z. & Gryczynski, I., 14 Jun 2013, In : Current Pharmaceutical Biotechnology. 14, 4, p. 470-474 5 p.

Research output: Contribution to journalArticle

Hyaluronoglucosaminidase
Urinary Bladder Neoplasms
Prostatic Neoplasms
Biomarkers
Fluorescence
28 Citations (Scopus)

Lenticular mitoprotection. Part A: Monitoring mitochondrial depolarization with JC-1 and artifactual fluorescence by the glycogen synthase kinase-3β inhibitor, SB216763

Brooks, M. M., Neelam, S., Fudala, R., Gryczynski, I. & Cammarata, P. R., 27 Jun 2013, In : Molecular Vision. 19, p. 1406-1412 7 p.

Research output: Contribution to journalArticle

Glycogen Synthase Kinase 3
Fluorescence
Mitochondrial Membranes
Permeability
Propidium
34 Citations (Scopus)

Long-Lived Bright Red Emitting Azaoxa-Triangulenium Fluorophores

Maliwal, B. P., Fudala, R., Raut, S., Kokate, R., Sørensen, T. J., Laursen, B. W., Gryczynski, Z. & Gryczynski, I., 7 May 2013, In : PLoS ONE. 8, 5, e63043.

Research output: Contribution to journalArticle

Fluorophores
fluorescent dyes
Fluorescence
fluorescence
Anisotropy

Rotation of myosin lever arms during isometric contraction of skeletal myofibrils

Midde, K., Rich, R., Hohreiter, V., Raut, S., Luchowski, R., Hinze, C., Fudala, R., Gryczynski, I., Gryczynski, Z. & Borejdo, J., 1 Feb 2013, Skeletal Muscle: Physiology, Classification and Disease. Nova Science Publishers, Inc., p. 1-24 24 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Isometric Contraction
Myofibrils
Myosins
Fluorescence
Sarcomeres
24 Citations (Scopus)

Time-resolved and temperature-dependent photoluminescence of ternary and quaternary nanocrystals of CuInS2 with ZnS capping and cation exchange

Seo, J., Raut, S. L., Abdel-Fattah, M., Rice, Q., Tabibi, B., Rich, R., Fudala, R., Gryczynski, I., Gryczynski, Z., Kim, W. J., Jung, S. & Hyun, R., 7 Sep 2013, In : Journal of Applied Physics. 114, 9, 094310.

Research output: Contribution to journalArticle

Commonwealth of Independent States
nanocrystals
photoluminescence
cations
temperature
2012
11 Citations (Scopus)
Hyaluronoglucosaminidase
Fluorescence Spectrometry
Hyaluronic Acid
Fluorescein
macromolecules
13 Citations (Scopus)

Extending Förster resonance energy transfer measurements beyond 100 Å using common organic fluorophores: Enhanced transfer in the presence of multiple acceptors

Maliwal, B. P., Raut, S., Fudala, R., D'Auria, S., Marzullo, V. M., Luini, A., Gryczynski, I. & Gryczynski, Z., 1 Jan 2012, In : Journal of Biomedical Optics. 17, 1, 011006.

Research output: Contribution to journalArticle

Fluorophores
Energy transfer
energy transfer
resonance fluorescence
Proteins
3 Citations (Scopus)
Trabecular Meshwork
Protein Isoforms
Dexamethasone
Proteins
tanespimycin
10 Citations (Scopus)

Hybrid optical materials of plasmon-coupled CdSe/ZnS coreshells for photonic applications

Seo, J., Fudala, R., Kim, W. J., Rich, R., Tabibi, B., Cho, H., Gryczynski, Z., Gryczynski, I. & Yu, W., 1 Aug 2012, In : Optical Materials Express. 2, 8, p. 1026-1039 14 p.

Research output: Contribution to journalArticle

Optical materials
Hybrid materials
Photonics
Spectroscopy
Polarization
9 Citations (Scopus)

Lifetime-based sensing of the hyaluronidase using fluorescein labeled hyaluronic acid

Fudala, R., Mummert, M. E., Gryczynski, Z., Rich, R., Borejdo, J. & Gryczynski, I., 5 Jan 2012, In : Journal of Photochemistry and Photobiology B: Biology. 106, 1, p. 69-73 5 p.

Research output: Contribution to journalArticle

Hyaluronoglucosaminidase
Hyaluronic Acid
Fluorescein
macromolecules
life (durability)
11 Citations (Scopus)

Metal enhanced fluorescence of Me-ADOTA·Cl dye by silver triangular nanoprisms on a gold film

Folmar, M., Shtoyko, T., Fudala, R., Akopova, I., Gryczynski, Z., Raut, S. L. & Gryczynski, I., 2 Apr 2012, In : Chemical Physics Letters. 531, p. 126-131 6 p.

Research output: Contribution to journalArticle

Silver
Gold
Coloring Agents
dyes
Metals
9 Citations (Scopus)

Novel aspects of urokinase function in the injured lung: Role of α2-macroglobulin

Komissarov, A. A., Stankowska, D., Krupa, A., Fudala, R., Florova, G., Florence, J., Fol, M., Allen, T. C., Idell, S., Matthay, M. A. & Kurdowska, A. K., 15 Dec 2012, In : American Journal of Physiology - Lung Cellular and Molecular Physiology. 303, 12, p. L1037-L1045

Research output: Contribution to journalArticle

Macroglobulins
Acute Lung Injury
Adult Respiratory Distress Syndrome
Urokinase-Type Plasminogen Activator
Lung
6 Citations (Scopus)

Properties of coatings on RFID p-Chips that support plasmonic fluorescence enhancement in bioassays

Rich, R., Li, J., Fudala, R., Gryczynski, Z., Gryczynski, I. & Mandecki, W., 1 Nov 2012, In : Analytical and Bioanalytical Chemistry. 404, 8, p. 2223-2231 9 p.

Research output: Contribution to journalArticle

Radio Frequency Identification Device
Bioassay
Silver
Radio frequency identification (RFID)
Islands
10 Citations (Scopus)

The presence of anti-LPS antibodies and human serum activity against Proteus mirabilis S/R forms in correlation with TLR4 (Thr399Ile) gene polymorphism in rheumatoid arthritis

Arabski, M., Fudala, R., Koza, A., Wasik, S., Futoma-Koloch, B., Bugla-Ploskonska, G. & Kaca, W., 1 Nov 2012, In : Clinical Biochemistry. 45, 16-17, p. 1374-1382 9 p.

Research output: Contribution to journalArticle

Proteus mirabilis
Polymorphism
Human Activities
Anti-Idiotypic Antibodies
Rheumatoid Arthritis
2011
19 Citations (Scopus)

Fluorescence detection of hyaluronidase

Fudala, R., Mummert, M. E., Gryczynski, Z. & Gryczynski, I., 2 Sep 2011, In : Journal of Photochemistry and Photobiology B: Biology. 104, 3, p. 473-477 5 p.

Research output: Contribution to journalArticle

Hyaluronoglucosaminidase
Hyaluronic Acid
Fluorescence
energy transfer
fluorescence
17 Citations (Scopus)
Matrix Metalloproteinases
Fluorescence
Peptides
Enzymes
Fluorescence Resonance Energy Transfer