Research output per year
Research output per year
Research output
Search results
-
2021
The adult phenylketonuria (Pku) gut microbiome
Mancilla, V. J., Mann, A. E., Zhang, Y. & Allen, M. S., Mar 2021, In: Microorganisms. 9, 3, p. 1-13 13 p., 530.Research output: Contribution to journal › Article › peer-review
Open Access -
2020
Comparative analysis of racial differences in breast tumor microbiome
Thyagarajan, S., Zhang, Y., Thapa, S., Allen, M. S., Phillips, N., Chaudhary, P., Kashyap, M. V. & Vishwanatha, J. K., 1 Dec 2020, In: Scientific Reports. 10, 1, 14116.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Comparison of the Bacterial Gut Microbiome of North American Triatoma spp. With and Without Trypanosoma cruzi
Mann, A. E., Mitchell, E. A., Zhang, Y., Curtis-Robles, R., Thapa, S., Hamer, S. A. & Allen, M. S., 13 Mar 2020, In: Frontiers in Microbiology. 11, 364.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
Effects of inhaled air pollution on markers of integrity, inflammation, and microbiota profiles of the intestines in Apolipoprotein E knockout mice
Fitch, M. N., Phillippi, D., Zhang, Y., Lucero, J. A., Pandey, R. S., Liu, J., Brower, J., Allen, M. S., Campen, M. J., McDonald, J. D. & Lund, A. K., Feb 2020, In: Environmental Research. 181, 108913.Research output: Contribution to journal › Article › peer-review
14 Scopus citations -
2019
Bacterial microbiomes of Ixodes scapularis ticks collected from Massachusetts and Texas, USA
Thapa, S., Zhang, Y. & Allen, M. S., 24 Jun 2019, In: BMC Microbiology. 19, 1, 138.Research output: Contribution to journal › Article › peer-review
Open Access18 Scopus citations -
Effects of temperature on bacterial microbiome composition in Ixodes scapularis ticks
Thapa, S., Zhang, Y. & Allen, M. S., May 2019, In: MicrobiologyOpen. 8, 5, e00719.Research output: Contribution to journal › Article › peer-review
20 Scopus citations -
Immunological responses to the relapsing fever spirochete borrelia turicatae in infected rhesus macaques: Implications for pathogenesis and diagnosis
Embers, M. E., Krishnavajhala, A., Armstrong, B. A., Curtis, M. W., Pahar, B., Wilder, H. K., Allen, M. S., Beare, P. A., Hasenkampf, N. R. & Lopez, J. E., 1 Apr 2019, In: Infection and Immunity. 87, 4, e00900.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
2018
Alterations to the Intestinal Microbiome and Metabolome of Pimephales promelas and Mus musculus Following Exposure to Dietary Methylmercury
Bridges, K. N., Zhang, Y., Curran, T. E., Magnuson, J. T., Venables, B. J., Durrer, K. E., Allen, M. S. & Roberts, A. P., 7 Aug 2018, In: Environmental Science and Technology. 52, 15, p. 8774-8784 11 p.Research output: Contribution to journal › Article › peer-review
28 Scopus citations -
Variations of the lung microbiome and immune response in mechanically ventilated surgical patients
Huebinger, R. M., Smith, A. D., Zhang, Y., Monson, N. L., Ireland, S. J., Barber, R. C., Kubasiak, J. C., Minshall, C. T., Minei, J. P., Wolf, S. E. & Allen, M. S., Oct 2018, In: PLoS ONE. 13, 10, e0205788.Research output: Contribution to journal › Article › peer-review
2 Scopus citations -
2017
Genetically engineered probiotic for the treatment of phenylketonuria (PKU); Assessment of a novel treatment in vitro and in the PAHenu2 mouse model of PKU
Durrer, K. E., Allen, M. S. & Von Herbing, I. H., May 2017, In: PLoS ONE. 12, 5, e0176286.Research output: Contribution to journal › Article › peer-review
20 Scopus citations -
Genome sequence of a Providencia stuartii strain isolated from Lucilia sericata salivary glands
Yuan, Y., Zhang, Y., Fu, S., Crippen, T. L., Visi, D. K., Eric Benbow, M., Allen, M. S., Tomberlin, J. K., Sze, S. H. & Tarone, A. M., 2017, In: Genome Announcements. 5, 17, e00250-17.Research output: Contribution to journal › Article › peer-review
3 Scopus citations -
Spatial Microbial Composition Along the Gastrointestinal Tract of Captive Attwater’s Prairie Chicken
Zhang, Y., Simon, S. E., Johnson, J. A. & Allen, M. S., 1 May 2017, In: Microbial Ecology. 73, 4, p. 966-977 12 p.Research output: Contribution to journal › Article › peer-review
9 Scopus citations -
Validation of droplet digital PCR for the detection and absolute quantification of Borrelia DNA in Ixodes scapularis ticks
King, J. L., Smith, A. D., Mitchell, E. A. & Allen, M. S., 1 Apr 2017, In: Parasitology. 144, 4, p. 359-367 9 p.Research output: Contribution to journal › Article › peer-review
9 Scopus citations -
2016
Common lung microbiome identified among mechanically ventilated surgical patients
Smith, A. D., Zhang, Y., Barber, R. C., Minshall, C. T., Huebinger, R. M. & Allen, M. S., Nov 2016, In: PLoS ONE. 11, 11, e0166313.Research output: Contribution to journal › Article › peer-review
4 Scopus citations -
Flocculation-related gene identification by whole-genome sequencing of Thauera aminoaromatica MZ1T floc-defective mutants
Prombutara, P. & Allen, M. S., 2016, In: Applied and Environmental Microbiology. 82, 6, p. 1646-1652 7 p.Research output: Contribution to journal › Article › peer-review
6 Scopus citations -
Frequency and distribution of rickettsiae, borreliae, and ehrlichiae detected in human-parasitizing ticks, Texas, USA
Mitchell, E. A., Williamson, P. C., Billingsley, P. M., Seals, J. P., Ferguson, E. E. & Allen, M. S., Feb 2016, In: Emerging Infectious Diseases. 22, 2, p. 312-315 4 p.Research output: Contribution to journal › Article › peer-review
17 Scopus citations -
Genome sequence of a Proteus mirabilis strain isolated from the salivary glands of larval Lucilia sericata
Yuan, Y., Zhang, Y., Fu, S., Crippen, T. L., Visi, D. K., Benbow, M. E., Allen, M. S., Tomberlin, J. K., Sze, S. H. & Tarone, A. M., 2016, In: Genome Announcements. 4, 4, e00672-16.Research output: Contribution to journal › Article › peer-review
4 Scopus citations -
2015
Rhodopseudomonas palustris CGA010 proteome implicates extracytoplasmic function sigma factor in stress response
Allen, M. S., Hurst, G. B., Lu, T. Y. S., Perry, L. M., Pan, C., Lankford, P. K. & Pelletier, D. A., 1 May 2015, In: Journal of Proteome Research. 14, 5, p. 2158-2168 11 p.Research output: Contribution to journal › Article › peer-review
2 Scopus citations -
2014
Effects of chemical versus enzymatic processing of kenaf fibers on poly(hydroxybutyrate-co-valerate)/poly(butylene adipate-co-terephthalate) composite properties
Yang, B., Nar, M., Visi, D. K., Allen, M., Ayre, B., Webber, C. L., Lu, H. & D'Souza, N. A., 2014, In: Composites Part B: Engineering. 56, p. 926-933 8 p.Research output: Contribution to journal › Article › peer-review
16 Scopus citations -
Phylogenetic relationship of serovar C-1 isolates of avibacterium paragallinarum
García-Sánchez, A., Morales-Erasto, V., Talavera-Rojas, M., Robles-González, F., Allen, M. S., Blackall, P. J. & Soriano-Vargas, E., Mar 2014, In: Avian Diseases. 58, 1, p. 143-146 4 p.Research output: Contribution to journal › Article › peer-review
8 Scopus citations -
2013
Investigation of the bacterial retting community of kenaf (Hibiscus cannabinus) under different conditions using next-generation semiconductor sequencing
Visi, D. K., D'Souza, N., Ayre, B. G., Webber, C. L. & Allen, M. S., May 2013, In: Journal of Industrial Microbiology and Biotechnology. 40, 5, p. 465-475 11 p.Research output: Contribution to journal › Article › peer-review
11 Scopus citations -
Preliminary Assessment of Microbiome Changes Following Blood-Feeding and Survivorship in the Amblyomma americanum Nymph-to-Adult Transition using Semiconductor Sequencing
Menchaca, A. C., Visi, D. K., Strey, O. F., Teel, P. D., Kalinowski, K., Allen, M. S. & Williamson, P. C., 24 Jun 2013, In: PLoS ONE. 8, 6, e67129.Research output: Contribution to journal › Article › peer-review
50 Scopus citations -
2012
Complete genome sequence of Thauera aminoaromatica strain MZ1T
Jiang, K., Sanseverino, J., Chauhan, A., Lucas, S., Copeland, A., Lapidus, A., Del Rio, T. G., Dalin, E., Tice, H., Bruce, D., Goodwin, L., Pitluck, S., Sims, D., Brettin, T., Detter, J. C., Han, C., Chang, Y. J., Larimer, F., Land, M., Hauser, L. & 10 others, , 2012, In: Standards in Genomic Sciences. 6, 3, p. 325-335 11 p.Research output: Contribution to journal › Article › peer-review
41 Scopus citations -
2008
Using noise to probe and characterize gene circuits
Cox, C. D., McCollum, J. M., Allen, M. S., Dar, R. D. & Simpson, M. L., 5 Aug 2008, In: Proceedings of the National Academy of Sciences of the United States of America. 105, 31, p. 10809-10814 6 p.Research output: Contribution to journal › Article › peer-review
46 Scopus citations -
2007
A destabilized bacterial luciferase for dynamic gene expression studies
Allen, M. S., Wilgus, J. R., Chewning, C. S., Sayler, G. S. & Simpson, M. L., Mar 2007, In: Systems and Synthetic Biology. 1, 1, p. 3-9 7 p.Research output: Contribution to journal › Article › peer-review
21 Scopus citations -
Direct quantification of N-(3-oxo-hexanoyl)-l-homoserine lactone in culture supernatant using a whole-cell bioreporter
Yan, L., Allen, M. S., Simpson, M. L., Sayler, G. S. & Cox, C. D., Jan 2007, In: Journal of Microbiological Methods. 68, 1, p. 40-45 6 p.Research output: Contribution to journal › Article › peer-review
17 Scopus citations -
2006
Frequency domain analysis of noise in simple gene circuits
Cox, C. D., McCollum, J. M., Austin, D. W., Allen, M. S., Dar, R. D. & Simpson, M. L., 2006, In: Chaos. 16, 2, 026102.Research output: Contribution to journal › Article › peer-review
35 Scopus citations -
Gene network shaping of inherent noise spectra
Austin, D. W., Allen, M. S., McCollum, J. M., Dar, R. D., Wilgus, J. R., Sayler, G. S., Samatova, N. F., Cox, C. D. & Simpson, M. L., 2 Feb 2006, In: Nature. 439, 7076, p. 608-611 4 p.Research output: Contribution to journal › Article › peer-review
215 Scopus citations -
2005
Molecular characterization of autoinduction of bioluminescence in the Microtox® indicator strain Vibrio fischeri ATCC 49387
Perry, L. L., Bright, N. G., Carroll, R. J., Scott, M. C., Allen, M. S. & Applegate, B. M., 1 Jul 2005, In: Canadian Journal of Microbiology. 51, 7, p. 549-557 9 p.Research output: Contribution to journal › Article › peer-review
3 Scopus citations -
2004
Analysis and glycosyl composition of the exopolysaccharide isolated from the floc-forming wastewater bacterium Thauera sp. MZ1T
Allen, M. S., Welch, K. T., Prebyl, B. S., Baker, D. C., Meyers, A. J. & Sayler, G. S., 1 Aug 2004, In: Environmental Microbiology. 6, 8, p. 780-790 11 p.Research output: Contribution to journal › Article › peer-review
74 Scopus citations -
2003
Analysis of Noise in Quorum Sensing
Cox, C. D., Peterson, G. D., Allen, M. S., Lancaster, J. M., McCollum, J. M., Austin, D., Yan, L., Sayler, G. S. & Simpson, M. L., 2003, In: OMICS A Journal of Integrative Biology. 7, 3, p. 317-334 18 p.Research output: Contribution to journal › Article › peer-review
34 Scopus citations