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20012024

Research activity per year

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Research Interests

Data science, Bioinformatics, Computational Biology, Population Genetics, Genomics

 

Area of Expertise

Dr. August Woerner's research interests are generally in the areas of computation and population genetics, with a focus in forensics, bioinformatics and machine learning. August’s current research projects run the gamut from streamlining bioinformatics pipelines—making them faster and more user friendly—to machine learning and statistical approaches to processing and calling MPS data, to inference problems in population genetics and genomics.

 

Techniques

Many of the tools I use and develop are inferential and typically are either classical (maximum likelihood or Bayesian inference) or modern (typically, machine learning).

 

Education/Academic qualification

MS in Computer Science, University of Arizona

PhD in Genetics, University of Arizona

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Collaborations and top research areas from the last five years

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  • Autosomal resequence data reveal late stone age signals of population expansion in Sub-Saharan African foraging and farming populations

    Cox, M. P., Morales, D. A., Woerner, A. E., Sozanski, J., Wall, J. D. & Hammer, M. F., 29 Jul 2009, In: PLoS ONE. 4, 7, e6366.

    Research output: Contribution to journalArticlepeer-review

  • Gibbon genome and the fast karyotype evolution of small apes

    Carbone, L., Alan Harris, R., Gnerre, S., Veeramah, K. R., Lorente-Galdos, B., Huddleston, J., Meyer, T. J., Herrero, J., Roos, C., Aken, B., Anaclerio, F., Archidiacono, N., Baker, C., Barrell, D., Batzer, M. A., Beal, K., Blancher, A., Bohrson, C. L., Brameier, M. & Campbell, M. S. & 73 others, Capozzi, O., Casola, C., Chiatante, G., Cree, A., Damert, A., De Jong, P. J., Dumas, L., Fernandez-Callejo, M., Flicek, P., Fuchs, N. V., Gut, I., Gut, M., Hahn, M. W., Hernandez-Rodriguez, J., Hillier, L. W., Hubley, R., Ianc, B., Izsvák, Z., Jablonski, N. G., Johnstone, L. M., Karimpour-Fard, A., Konkel, M. K., Kostka, D., Lazar, N. H., Lee, S. L., Lewis, L. R., Liu, Y., Locke, D. P., Mallick, S., Mendez, F. L., Muffato, M., Nazareth, L. V., Nevonen, K. A., O'Bleness, M., Ochis, C., Odom, D. T., Pollard, K. S., Quilez, J., Reich, D., Rocchi, M., Schumann, G. G., Searle, S., Sikela, J. M., Skollar, G., Smit, A., Sonmez, K., Ten Hallers, B., Terhune, E., Thomas, G. W. C., Ullmer, B., Ventura, M., Walker, J. A., Wall, J. D., Walter, L., Ward, M. C., Wheelan, S. J., Whelan, C. W., White, S., Wilhelm, L. J., Woerner, A. E., Yandell, M., Zhu, B., Hammer, M. F., Marques-Bonet, T., Eichler, E. E., Fulton, L., Fronick, C., Muzny, D. M., Warren, W. C., Worley, K. C., Rogers, J., Wilson, R. K. & Gibbs, R. A., 11 Sep 2014, In: Nature. 513, 7517, p. 195-201 7 p.

    Research output: Contribution to journalArticlepeer-review

  • Higher levels of Neanderthal ancestry in east Asians than in Europeans

    Wall, J. D., Yang, M. A., Jay, F., Kim, S. K., Durand, E. Y., Stevison, L. S., Gignoux, C., Woerner, A., Hammer, M. F. & Slatkin, M., 2013, In: Genetics. 194, 1, p. 199-209 11 p.

    Research output: Contribution to journalArticlepeer-review

  • Model-based analyses of whole-genome data reveal a complex evolutionary history involving archaic introgression in Central African Pygmies

    Hsieh, P. H., Woerner, A. E., Wall, J. D., Lachance, J., Tishkoff, S. A., Gutenkunst, R. N. & Hammer, M. F., Mar 2016, In: Genome Research. 26, 3, p. 291-300 10 p.

    Research output: Contribution to journalArticlepeer-review

  • Modeling SNP array ascertainment with Approximate Bayesian Computation for demographic inference

    Quinto-Cortés, C. D., Woerner, A. E., Watkins, J. C. & Hammer, M. F., 1 Dec 2018, In: Scientific Reports. 8, 1, 10209.

    Research output: Contribution to journalArticlepeer-review