Microbiology, Immunology & Genetics

2013

Haplotype data for 23 Y-chromosome markers in four U.S. population groups

Coble, M. D., Hill, C. R. & Butler, J. M., May 2013, In: Forensic Science International: Genetics. 7, 3, p. e66-e68

Research output: Contribution to journal › Article › peer-review

Higher levels of Neanderthal ancestry in east Asians than in Europeans

Wall, J. D., Yang, M. A., Jay, F., Kim, S. K., Durand, E. Y., Stevison, L. S., Gignoux, C., Woerner, A., Hammer, M. F. & Slatkin, M., 2013, In: Genetics. 194, 1, p. 199-209 11 p.

Research output: Contribution to journal › Article › peer-review

169 Scopus citations

High-throughput screening of stem cell therapy for globoid cell leukodystrophy using automated neurophenotyping of twitcher mice

Scruggs, B. A., Bowles, A. C., Zhang, X., Semon, J. A., Kyzar, E. J., Myers, L., Kalueff, A. V. & Bunnell, B. A., 1 Jan 2013, In: Behavioural Brain Research. 236, 1, p. 35-47 13 p.

Research output: Contribution to journal › Article › peer-review

10 Scopus citations

HIV-1 Nef-mediated T-cell activation and chemotaxis are decoupled using a HIV-1/SIVpbj1.9. chimeric nef variant

Park, I. W. & He, J. J., Apr 2013, In: Archives of Virology. 158, 4, p. 845-852 8 p.

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

Identification of genes upregulated by the transcription factor bcr1 that are involved in impermeability, impenetrability, and drug resistance of Candida albicans a/α biofilms

Srikantha, T., Daniels, K. J., Pujol, C., Kim, E. & Soll, D. R., Jun 2013, In: Eukaryotic Cell. 12, 6, p. 875-888 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

41 Scopus citations

IL-21 promotes the production of anti-DNA IgG but is dispensable for kidney damage in lyn^-/- mice

Gutierrez, T., Mayeux, J. M., Ortega, S. B., Karandikar, N. J., Li, Q. Z., Rakheja, D., Zhou, X. J. & Satterthwaite, A. B., Feb 2013, In: European Journal of Immunology. 43, 2, p. 382-393 12 p.

Research output: Contribution to journal › Article › peer-review

Open Access

13 Scopus citations

Impact of environmental conditions on the form and function of Candida albicans biofilms

Daniels, K. J., Park, Y. N., Srikantha, T., Pujol, C. & Soll, D. R., Oct 2013, In: Eukaryotic Cell. 12, 10, p. 1389-1402 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

38 Scopus citations

Improvement of short tandem repeat analysis of samples highly contaminated by humic acid

Seo, S. B., Jin, H. X., Lee, H. Y., Ge, J., King, J. L., Lyoo, S. H., Shin, D. H. & Lee, S. D., 2013, In: Journal of Forensic and Legal Medicine. 20, 7, p. 922-928 7 p.

Research output: Contribution to journal › Article › peer-review

10 Scopus citations

Inhibition of HCV Replication by Oxysterol-Binding Protein-Related Protein 4 (ORP4) through Interaction with HCV NS5B and Alteration of Lipid Droplet Formation

Park, I. W., Ndjomou, J., Wen, Y., Liu, Z., Ridgway, N. D., Kao, C. C. & He, J. J., 16 Sep 2013, In: PLoS ONE. 8, 9, e75648.

Research output: Contribution to journal › Article › peer-review

Open Access

14 Scopus citations

Inhibition of HIV-1 transcription and replication by a newly identified cyclin T1 splice variant

Gao, G., Wu, X., Zhou, J., He, M., He, J. J. & Guo, D., 17 May 2013, In: Journal of Biological Chemistry. 288, 20, p. 14297-14309 13 p.

Research output: Contribution to journal › Article › peer-review

Open Access

8 Scopus citations

Interleukin-23 (IL-23) deficiency disrupts Th17 and Th1-related defenses against Streptococcus pneumoniae infection

Kim, B. J., Lee, S., Berg, R. E., Simecka, J. W. & Jones, H. P., Oct 2013, In: Cytokine. 64, 1, p. 375-381 7 p.

Research output: Contribution to journal › Article › peer-review

20 Scopus citations

Intersection of Smoking, Human immunodeficiency virus/acquired immunodeficiency syndrome and Cancer: Proceedings of the 8th annual Texas conference on health disparities

Rajendiran, S., Kashyap, M. & Vishwanatha, J., 1 Jan 2013, In: Journal of Carcinogenesis. 12, 119388.

Research output: Contribution to journal › Article › peer-review

Open Access

2 Scopus citations

Intranasal delivery of nanoparticle-based vaccine increases protection against S. pneumoniae

Mott, B., Thamake, S., Vishwanatha, J. & Jones, H. P., May 2013, In: Journal of Nanoparticle Research. 15, 5, 1646.

Research output: Contribution to journal › Article › peer-review

3 Scopus citations

Investigation of the bacterial retting community of kenaf (Hibiscus cannabinus) under different conditions using next-generation semiconductor sequencing

Visi, D. K., D'Souza, N., Ayre, B. G., Webber, C. L. & Allen, M. S., May 2013, In: Journal of Industrial Microbiology and Biotechnology. 40, 5, p. 465-475 11 p.

Research output: Contribution to journal › Article › peer-review

15 Scopus citations

KRAS testing and epidermal growth factor receptor inhibitor treatment for colorectal cancer in community settings

Webster, J., Kauffman, T. L., Feigelson, H. S., Pawloski, P. A., Onitilo, A. A., Potosky, A. L., Cross, D., Meier, P. R., Mirabedi, A. S., Delate, T., Daida, Y., Williams, A. E., Alexander, G. L., McCarty, C. A., Honda, S., Kushi, L. H. & Goddard, K. A. B., Jan 2013, In: Cancer Epidemiology Biomarkers and Prevention. 22, 1, p. 91-101 11 p.

Research output: Contribution to journal › Article › peer-review

19 Scopus citations

Lenticular mitoprotection. Part A: Monitoring mitochondrial depolarization with JC-1 and artifactual fluorescence by the glycogen synthase kinase-3β inhibitor, SB216763

Brooks, M. M., Neelam, S., Fudala, R., Gryczynski, I. & Cammarata, P. R., 27 Jun 2013, In: Molecular vision. 19, p. 1406-1412 7 p.

Research output: Contribution to journal › Article › peer-review

62 Scopus citations

Long-Lived Bright Red Emitting Azaoxa-Triangulenium Fluorophores

Maliwal, B. P., Fudala, R., Raut, S., Kokate, R., Sørensen, T. J., Laursen, B. W., Gryczynski, Z. & Gryczynski, I., 7 May 2013, In: PLoS ONE. 8, 5, e63043.

Research output: Contribution to journal › Article › peer-review

Open Access

42 Scopus citations

Mitigating prolonged QT interval in cancer nanodrug development for accelerated clinical translation

Ranjan, A. P., Mukerjee, A., Helson, L. & Vishwanatha, J. K., 14 Dec 2013, In: Journal of Nanobiotechnology. 11, 1, 40.

Research output: Contribution to journal › Article › peer-review

Open Access

10 Scopus citations

Multipotent stromal cells alleviate inflammation, neuropathology, and symptoms associated with globoid cell leukodystrophy in the twitcher mouse

Scruggs, B. A., Zhang, X., Bowles, A. C., Gold, P. A., Semon, J. A., Fisher-Perkins, J. M., Zhang, S., Bonvillain, R. W., Myers, L., Li, S. C., Kalueff, A. V. & Bunnell, B. A., Aug 2013, In: Stem Cells. 31, 8, p. 1523-1534 12 p.

Research output: Contribution to journal › Article › peer-review

22 Scopus citations

Mutation rates at 16 Y-chromosome STRs in the South China Han population

Weng, W., Liu, H., Li, S., Ge, J., Wang, H. & Liu, C., 1 Mar 2013, In: International journal of legal medicine. 127, 2, p. 369-372 4 p.

Research output: Contribution to journal › Article › peer-review

13 Scopus citations

Mutations in the X-linked retinitis pigmentosa genes RPGR and RP2 found in 8.5% of families with a provisional diagnosis of autosomal dominant retinitis pigmentosa

Churchill, J. D., Bowne, S. J., Sullivan, L. S., Lewis, R. A., Wheaton, D. K., Birch, D. G., Branham, K. E., Heckenlively, J. R. & Daiger, S. P., Feb 2013, In: Investigative Ophthalmology and Visual Science. 54, 2, p. 1411-1416 6 p.

Research output: Contribution to journal › Article › peer-review

107 Scopus citations

Nanoparticle-mediated catalase delivery protects human neurons from oxidative stress

Singhal, A., Morris, V. B., Labhasetwar, V. & Ghorpade, A., Nov 2013, In: Cell Death and Disease. 4, 11, e903.

Research output: Contribution to journal › Article › peer-review

Open Access

99 Scopus citations

Nonhuman primate lung decellularization and recellularization using a specialized large-organ bioreactor.

Bonvillain, R. W., Scarritt, M. E., Pashos, N. C., Mayeux, J. P., Meshberger, C. L., Betancourt, A. M., Sullivan, D. E. & Bunnell, B. A., 2013, In: Journal of Visualized Experiments. 82, p. e50825

Research output: Contribution to journal › Article › peer-review

45 Scopus citations

Novel Interaction between Proliferating Cell Nuclear Antigen and HLA I on the Surface of Tumor Cells Inhibits NK Cell Function through NKp44

Horton, N. C., Mathew, S. O. & Mathew, P. A., 19 Mar 2013, In: PLoS ONE. 8, 3, e59552.

Research output: Contribution to journal › Article › peer-review

Open Access

43 Scopus citations

Obesity associated alterations in the biology of adipose stem cells mediate enhanced tumorigenesis by estrogen dependent pathways

Strong, A. L., Strong, T. A., Rhodes, L. V., Semon, J. A., Zhang, X., Shi, Z., Zhang, S., Gimble, J. M., Burow, M. E. & Bunnell, B. A., 31 Oct 2013, In: Breast Cancer Research. 15, 5, R102.

Research output: Contribution to journal › Article › peer-review

Open Access

90 Scopus citations

P300 regulates the human RLIP76 promoter activity and gene expression

Sehrawat, A., Yadav, S., Awasthi, Y. C., Basu, A., Warden, C. & Awasthi, S., 15 Apr 2013, In: Biochemical Pharmacology. 85, 8, p. 1203-1211 9 p.

Research output: Contribution to journal › Article › peer-review

12 Scopus citations

Polarization and symmetry of electronic transitions in long fluorescence lifetime triangulenium dyes

Thyrhaug, E., Sørensen, T. J., Gryczynski, I., Gryczynski, Z. & Laursen, B. W., 14 Mar 2013, In: Journal of Physical Chemistry A. 117, 10, p. 2160-2168 9 p.

Research output: Contribution to journal › Article › peer-review

37 Scopus citations

Polarization properties of fluorescent BSA protected Au₂₅ nanoclusters

Raut, S., Chib, R., Rich, R., Shumilov, D., Gryczynski, Z. & Gryczynski, I., 21 Apr 2013, In: Nanoscale. 5, 8, p. 3441-3446 6 p.

Research output: Contribution to journal › Article › peer-review

48 Scopus citations

Preliminary Assessment of Microbiome Changes Following Blood-Feeding and Survivorship in the Amblyomma americanum Nymph-to-Adult Transition using Semiconductor Sequencing

Menchaca, A. C., Visi, D. K., Strey, O. F., Teel, P. D., Kalinowski, K., Allen, M. S. & Williamson, P. C., 24 Jun 2013, In: PLoS ONE. 8, 6, e67129.

Research output: Contribution to journal › Article › peer-review

Open Access

64 Scopus citations

Pressure cycling technology (PCT) reduces effects of inhibitors of the PCR

Marshall, P. L., King, J. L., Lawrence, N. P., Lazarev, A., Gross, V. S. & Budowle, B., Mar 2013, In: International journal of legal medicine. 127, 2, p. 321-333 13 p.

Research output: Contribution to journal › Article › peer-review

8 Scopus citations

Prototype PowerPlex^® Y23 System: A concordance study

Davis, C., Ge, J., Sprecher, C., Chidambaram, A., Thompson, J., Ewing, M., Fulmer, P., Rabbach, D., Storts, D. & Budowle, B., Jan 2013, In: Forensic Science International: Genetics. 7, 1, p. 204-208 5 p.

Research output: Contribution to journal › Article › peer-review

Open Access

33 Scopus citations

Reversing the Warburg effect as a treatment for glioblastoma

Poteet, E., Choudhury, G. R., Winters, A., Li, W., Ryou, M. G., Liu, R., Tang, L., Ghorpade, A., Wen, Y., Yuan, F., Keir, S. T., Yan, H., Bigner, D. D., Simpkins, J. W. & Yang, S. H., 29 Mar 2013, In: Journal of Biological Chemistry. 288, 13, p. 9153-9164 12 p.

Research output: Contribution to journal › Article › peer-review

Open Access

67 Scopus citations

Role of the p63-FoxN1 regulatory axis in thymic epithelial cell homeostasis during aging

Burnley, P., Rahman, M., Wang, H., Zhang, Z., Sun, X., Zhuge, Q. & Su, D. M., Nov 2013, In: Cell Death and Disease. 4, 11, e932.

Research output: Contribution to journal › Article › peer-review

Open Access

39 Scopus citations

Single nucleotide polymorphism typing with massively parallel sequencing for human identification

Seo, S. B., King, J. L., Warshauer, D. H., Davis, C. P., Ge, J. & Budowle, B., Nov 2013, In: International journal of legal medicine. 127, 6, p. 1079-1086 8 p.

Research output: Contribution to journal › Article › peer-review

103 Scopus citations

STRait Razor: A length-based forensic STR allele-calling tool for use with second generation sequencing data

Warshauer, D. H., Lin, D., Hari, K., Jain, R., Davis, C., Larue, B., King, J. L. & Budowle, B., 2013, In: Forensic Science International: Genetics. 7, 4, p. 409-417 9 p.

Research output: Contribution to journal › Article › peer-review

93 Scopus citations

Stromal cells from the adipose tissue-derived stromal vascular fraction and culture expanded adipose tissue-derived stromal/stem cells: A joint statement of the International Federation for Adipose Therapeutics and Science (IFATS) and the International Society for Cellular Therapy (ISCT)

Bourin, P., Bunnell, B. A., Casteilla, L., Dominici, M., Katz, A. J., March, K. L., Redl, H., Rubin, J. P., Yoshimura, K. & Gimble, J. M., Jun 2013, In: Cytotherapy. 15, 6, p. 641-648 8 p.

Research output: Contribution to journal › Article › peer-review

1281 Scopus citations

Synthesis and luminescence characteristics of Dy³⁺ ions in silica xerogels doped with Ln_2-xDy_x(WO ₄)₃

Grobelna, B., Synak, A., Bojarski, P., Szczodrowski, K., Kukliński, B., Raut, S. & Gryczyński, I., Jan 2013, In: Optical Materials. 35, 3, p. 456-461 6 p.

Research output: Contribution to journal › Article › peer-review

22 Scopus citations

Tamoxifen-induced venothromboembolic events: Exploring validation of putative genetic association

Glurich, I., Chyou, P. H., Engel, J. M., Cross, D. S. & Onitilo, A. A., 2013, In: Clinical Medicine and Research. 11, 1, p. 16-25 10 p.

Research output: Contribution to journal › Article › peer-review

Open Access

5 Scopus citations

The disease-ameliorating function of autoregulatory CD8 T cells is mediated by targeting of encephalitogenic CD4 T cells in experimental autoimmune encephalomyelitis

Ortega, S. B., Kashi, V. P., Tyler, A. F., Cunnusamy, K., Mendoza, J. P. & Karandikar, N. J., 1 Jul 2013, In: Journal of Immunology. 191, 1, p. 117-126 10 p.

Research output: Contribution to journal › Article › peer-review

Open Access

42 Scopus citations

Time-resolved and temperature-dependent photoluminescence of ternary and quaternary nanocrystals of CuInS₂ with ZnS capping and cation exchange

Seo, J., Raut, S., Abdel-Fattah, M., Rice, Q., Tabibi, B., Rich, R., Fudala, R., Gryczynski, I., Gryczynski, Z., Kim, W. J., Jung, S. & Hyun, R., 7 Sep 2013, In: Journal of Applied Physics. 114, 9, 094310.

Research output: Contribution to journal › Article › peer-review

32 Scopus citations

Tip110 interacts with YB-1 and regulates each other's function

Timani, K. A., Liu, Y. & He, J. J., 4 Jul 2013, In: BMC Molecular Biology. 14, 14.

Research output: Contribution to journal › Article › peer-review

12 Scopus citations

Two photon induced luminescence of BSA protected gold clusters

Raut, S. L., Shumilov, D., Chib, R., Rich, R., Gryczynski, Z. & Gryczynski, I., 13 Mar 2013, In: Chemical Physics Letters. 561-562, p. 74-76 3 p.

Research output: Contribution to journal › Article › peer-review

16 Scopus citations

Underutilization of Lynch syndrome screening in a multisite study of patients with colorectal cancer

Cross, D. S., Rahm, A. K., Kauffman, T. L., Webster, J., Le, A. Q., Spencer Feigelson, H., Alexander, G., Meier, P., Onitilo, A. A., Pawloski, P. A., Williams, A. E., Honda, S., Daida, Y. H., Mccarty, C. A. & Goddard, K. A. B., Dec 2013, In: Genetics in Medicine. 15, 12, p. 933-940 8 p.

Research output: Contribution to journal › Article › peer-review

Open Access

36 Scopus citations

Upregulation of PKCη by PKCε and PDK1 involves two distinct mechanisms and promotes breast cancer cell survival

Pal, D., Outram, S. P. & Basu, A., 2013, In: Biochimica et Biophysica Acta - General Subjects. 1830, 8, p. 4040-4045 6 p.

Research output: Contribution to journal › Article › peer-review

13 Scopus citations

Validation of the PLEX-ID^TM mass spectrometry mitochondrial DNA assay

Warshauer, D. H., King, J., Eisenberg, A. J. & Budowle, B., 1 Mar 2013, In: International journal of legal medicine. 127, 2, p. 277-286 10 p.

Research output: Contribution to journal › Article › peer-review

6 Scopus citations

YY1 and a unique DNA repeat element regulates the transcription of mouse CS1 (CD319, SLAMF7) gene

Dongre, P., Mathew, S., Akopova, I., Gryczynski, I. & Mathew, P., Jul 2013, In: Molecular Immunology. 54, 3-4, p. 254-263 10 p.

Research output: Contribution to journal › Article › peer-review

7 Scopus citations

2012

A Case of Amelogenin Y-null: A simple primer binding site mutation or unusual genetic anomaly?

Davis, C., Illescas, M., Tirado, C., Lopez, R., Budowle, B. & Cruz, T. D., Nov 2012, In: Legal Medicine. 14, 6, p. 320-323 4 p.

Research output: Contribution to journal › Article › peer-review

7 Scopus citations

A comparative study of phytoestrogen action in mitigating apoptosis induced by oxidative stress

Ondricek, A. J., Kashyap, A. K., Thamake, S. I. & Vishwanatha, J. K., 1 Sep 2012, In: In Vivo. 26, 5, p. 765-775 11 p.

Research output: Contribution to journal › Article › peer-review

15 Scopus citations

Adipose-derived stem cells on hyaluronic acid-derived scaffold: A new horizon in bioengineered cornea

Espandar, L., Bunnell, B., Wang, G. Y., Gregory, P., McBride, C. & Moshirfar, M., Feb 2012, In: Archives of Ophthalmology. 130, 2, p. 202-208 7 p.

Research output: Contribution to journal › Article › peer-review

Open Access

47 Scopus citations

Age-related disruption of steady-state thymic medulla provokes autoimmune phenotype via perturbing negative selection

Xia, J., Wang, H., Guo, J., Zhang, Z., Coder, B. & Su, D. M., 2012, In: Aging and Disease. 3, 3, p. 248-259 12 p.

Research output: Contribution to journal › Article › peer-review

34 Scopus citations

Microbiology, Immunology & Genetics

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